Solved! Though, it did cost me another server, lol.
So, after exhausting all other choices, I decided to purchase a new server and MAYBE salvage our old server save file, uploading it to the new server. Well, not only did that work, I came across the issue that killed our old server. I compared server configs between the two, and found that our old server config had almost no information on it. I didn't realize that each role code (suplayer, crplayer, sumod, etc) is supposed to be individually defined within the config, as well as plenty more information. I have no clue what happened to the old config, but it only had like 30 lines of code as opposed to the 336 that our new server had.